deploy: Drop fsync of modified config files
These fsyncs were added for what turned out to be a fairly bogus reason; I was hitting read errors from extlinux after upgrades and out of conservatisim tried adding fsync calls, but the *actual* problem was that extlinux didn't support 64 bit ext4. Now that at least for Project Atomic hosts we're just targeting grub2, we can drop these fsync calls and rely on `syncfs()` being both faster and catching any errors.
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Submodule libglnx updated: 381ca54ee3...371172bcfd.
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